- Predicted Gene MLOC_55495
MLOC_55495 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 10.0398 | 3.26809 | 6.0104 | 6.2414 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 1.89835 | 0 | 0.266577 | 0.951745 |
| INF1 | Young developing inflorescences (5mm) | 10.7601 | 11.6549 | 17.0449 | 13.9444 |
| INF2 | Developing inflorescences (1-1.5 cm) | 8.64465 | 9.25758 | 7.3935 | 11.4357 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 5.18992 | 1.68593 | 4.70043 | 3.27852 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 0 | 0.0566191 | 0.0198018 | 0.210265 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 6.37567 | 5.49844 | 8.62268 | 7.80693 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 0.189357 | 0 | 0.274295 | 0.435131 |
CDS Structure of MLOC_55495
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_55495.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os03g17100.1 |
-1 |
2e-51 |
168 |
103/112 (92%) |
13103.m02043 protein Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed |
| TAIR PP10 |
AT5G02560.1 |
-1 |
4e-47 |
155 |
93/112 (83%) |
| Symbols: HTA12 | histone H2A 12 | chr5:575437-576456 FORWARD LENGTH=153 |