MLOC_55471 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains5.670945.151174.760820
LEAShoots from the seedlings (10 cm shoot stage)5.793654.981344.893110
INF1Young developing inflorescences (5mm)7.453116.462586.300750
INF2Developing inflorescences (1-1.5 cm)6.250227.89346.764430
ROORoots from the seedlings (10 cm shoot stage)6.075397.41654.650890
NODDeveloping tillers at six leaf stage, 3rd internode4.326278.287357.819710
CAR5Developing grain, bracts removed (5 DPA)7.573978.969056.937290
CAR15Developing grain, bracts removed (15 DPA)4.18064.654854.481590



CDS Structure of MLOC_55471






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK363508
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK363508CUST_20727_PI427708080NoneNoneNone
MLOC_3516.1NoneAvailableNonecontig_131375 (Mapped)
MLOC_55471.2NoneAvailableNonecontig_39998 (Mapped)
MLOC_75868.1NoneAvailableAvailablecontig_69228 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----