- Predicted Gene MLOC_55469
MLOC_55469 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_55469_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_55469_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 0.417264 | 0.729973 | 0.701599 | 0.607778 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 0.516191 | 0.541996 | 0.310812 | 0.378474 |
INF1 | Young developing inflorescences (5mm) | 1.95222 | 1.98688 | 1.45114 | 1.47952 |
INF2 | Developing inflorescences (1-1.5 cm) | 1.25274 | 1.36284 | 1.35716 | 1.36839 |
ROO | Roots from the seedlings (10 cm shoot stage) | 0.828304 | 0.873446 | 0.478931 | 0.963261 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0 | 0.025249 | 0.0620519 | 0.154066 |
CAR5 | Developing grain, bracts removed (5 DPA) | 0.887844 | 1.14072 | 0.999775 | 0.926909 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0.313339 | 0.292173 | 0.161064 | 0.601813 |
CDS Structure of MLOC_55469
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_55469.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os04g35650.1 |
+3 |
0.0 |
1039 |
542/689 (79%) |
13104.m03482 protein pentatricopeptide, putative, expressed |
TAIR PP10 |
AT3G26540.1 |
+3 |
8e-166 |
506 |
273/605 (45%) |
Tetratricopeptide repeat (TPR)-like superfamily protein | chr3:9744542-9746644 REVERSE LENGTH=700 |