- Predicted Gene MLOC_55460
MLOC_55460 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_55460_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_55460_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 1.9237 | 0.982136 | 0.881173 | 1.071 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 1.12319 | 0.638595 | 1.40008 | 0.790273 |
INF1 | Young developing inflorescences (5mm) | 0.248599 | 0.198913 | 0.205069 | 0.188598 |
INF2 | Developing inflorescences (1-1.5 cm) | 0.398787 | 0.128233 | 0.353329 | 0.321888 |
ROO | Roots from the seedlings (10 cm shoot stage) | 0.772515 | 0.215723 | 0.283557 | 0.302827 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0.551676 | 0.412757 | 0.655734 | 1.09153 |
CAR5 | Developing grain, bracts removed (5 DPA) | 11.6161 | 22.524 | 15.7605 | 16.2215 |
CAR15 | Developing grain, bracts removed (15 DPA) | 200.444 | 127.598 | 171.866 | 415.414 |
CDS Structure of MLOC_55460
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_55460.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os04g46200.1 |
-1 |
2e-53 |
176 |
122/159 (77%) |
13104.m04645 protein oleosin, putative, expressed |
TAIR PP10 |
AT4G25140.1 |
-1 |
3e-30 |
115 |
67/110 (61%) |
| Symbols: OLEO1, OLE1 | oleosin 1 | chr4:12900498-12901259 FORWARD LENGTH=173 |