- Predicted Gene MLOC_55452
MLOC_55452 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 0 | 0 | 0 | 0 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 0 | 0.117384 | 0.0988698 | 0.15667 |
| INF1 | Young developing inflorescences (5mm) | 0 | 0 | 0.0741883 | 0.0464024 |
| INF2 | Developing inflorescences (1-1.5 cm) | 0.0499267 | 0 | 0 | 0.0607682 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 0 | 0.0703023 | 0.201087 | 0.138535 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 0 | 0.00851529 | 0 | 0.0712028 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 0 | 0 | 0 | 0 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 1.01489 | 0.938561 | 0.185403 | 1.81801 |
CDS Structure of MLOC_55452
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_55452.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os01g04680.1 |
+1 |
2e-35 |
108 |
58/155 (37%) |
13101.m00429 protein retrotransposon protein, putative, unclassified |
| TAIR PP10 | None | - | - | - | - | - |