MLOC_55452 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0000
LEAShoots from the seedlings (10 cm shoot stage)00.1173840.09886980.15667
INF1Young developing inflorescences (5mm)000.07418830.0464024
INF2Developing inflorescences (1-1.5 cm)0.0499267000.0607682
ROORoots from the seedlings (10 cm shoot stage)00.07030230.2010870.138535
NODDeveloping tillers at six leaf stage, 3rd internode00.0085152900.0712028
CAR5Developing grain, bracts removed (5 DPA)0000
CAR15Developing grain, bracts removed (15 DPA)1.014890.9385610.1854031.81801



CDS Structure of MLOC_55452






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_55452.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_55452.1CUST_13377_PI427708080AvailableAvailablecontig_39979 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g04680.1 +1 2e-35 108 58/155 (37%) 13101.m00429 protein retrotransposon protein, putative, unclassified
TAIR PP10None-----