- Predicted Gene MLOC_55451
MLOC_55451 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 0.0743357 | 0 | 0 | 0.0670647 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 0.122917 | 0 | 0 | 0.130397 |
| INF1 | Young developing inflorescences (5mm) | 0.204194 | 0 | 0.34071 | 0.21027 |
| INF2 | Developing inflorescences (1-1.5 cm) | 0.276928 | 0.0509916 | 0.833677 | 0.290209 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 0 | 0.142865 | 0 | 0.372838 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 0.0634346 | 0.0888649 | 0.0203264 | 0.240429 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 0 | 0.0603144 | 0 | 0.0631086 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 0.151885 | 0 | 0.332748 | 0.458017 |
CDS Structure of MLOC_55451
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_55451.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os11g08550.1 |
+2 |
2e-53 |
192 |
88/182 (48%) |
13111.m00902 protein retrotransposon protein, putative, unclassified |
| TAIR PP10 |
AT4G20520.1 |
+2 |
5e-12 |
66 |
31/83 (37%) |
RNA binding;RNA-directed DNA polymerases | chr4:11045912-11047716 FORWARD LENGTH=376 |