MLOC_55444 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.6216210.3655830.2439480.474964
LEAShoots from the seedlings (10 cm shoot stage)81.089659.1681122.41383.7263
INF1Young developing inflorescences (5mm)0.278037000.256365
INF2Developing inflorescences (1-1.5 cm)0.301997000.375459
ROORoots from the seedlings (10 cm shoot stage)0.7777271.713536.155353.265
NODDeveloping tillers at six leaf stage, 3rd internode20.36766.0357133.489439.6932
CAR5Developing grain, bracts removed (5 DPA)0000
CAR15Developing grain, bracts removed (15 DPA)00.13683600.687297



CDS Structure of MLOC_55444






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK357833
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK357833CUST_24056_PI427708080NoneNoneNone
MLOC_43571.1NoneAvailableNonecontig_271402 (Not mapped)
MLOC_55444.1NoneAvailableAvailablecontig_399758 (Not mapped)
MLOC_77272.1NoneAvailableNonecontig_74992 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----