- Predicted Gene MLOC_55407
MLOC_55407 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_55407_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_55407_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 6.40912 | 4.21127 | 5.28204 | 4.85161 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 3.64825 | 4.41952 | 4.73056 | 3.39738 |
INF1 | Young developing inflorescences (5mm) | 5.26171 | 6.17453 | 6.62359 | 4.94004 |
INF2 | Developing inflorescences (1-1.5 cm) | 4.72825 | 5.64346 | 5.81888 | 5.62925 |
ROO | Roots from the seedlings (10 cm shoot stage) | 6.25866 | 6.31979 | 9.97378 | 7.65146 |
NOD | Developing tillers at six leaf stage, 3rd internode | 8.97972 | 9.16291 | 16.828 | 30.7885 |
CAR5 | Developing grain, bracts removed (5 DPA) | 6.42436 | 7.002 | 7.02152 | 6.52422 |
CAR15 | Developing grain, bracts removed (15 DPA) | 2.76618 | 2.00066 | 1.59684 | 5.1481 |
CDS Structure of MLOC_55407
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_55407.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os05g32590.1 |
-3 |
2e-122 |
360 |
190/264 (72%) |
13105.m03359 protein methyltransferase, putative, expressed |
TAIR PP10 |
AT3G60910.1 |
-3 |
2e-77 |
243 |
130/235 (55%) |
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein | chr3:22501727-22503182 FORWARD LENGTH=252 |