- Predicted Gene MLOC_55380
MLOC_55380 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_55380_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_55380_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 18.6613 | 15.3239 | 13.6375 | 16.3328 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 9.18464 | 7.96286 | 8.56762 | 7.09987 |
INF1 | Young developing inflorescences (5mm) | 5.27879 | 5.2261 | 6.61366 | 5.18175 |
INF2 | Developing inflorescences (1-1.5 cm) | 3.12192 | 5.32539 | 4.05608 | 5.07879 |
ROO | Roots from the seedlings (10 cm shoot stage) | 11.1349 | 15.9238 | 13.4192 | 17.3917 |
NOD | Developing tillers at six leaf stage, 3rd internode | 1.14511 | 2.04145 | 1.28989 | 5.39568 |
CAR5 | Developing grain, bracts removed (5 DPA) | 23.2574 | 25.7002 | 22.6489 | 25.1692 |
CAR15 | Developing grain, bracts removed (15 DPA) | 5.7326 | 8.05025 | 7.30109 | 18.9454 |
CDS Structure of MLOC_55380
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_55380.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os02g20360.1 |
-1 |
0.0 |
634 |
325/409 (79%) |
13102.m02277 protein tyrosine aminotransferase, putative, expressed |
TAIR PP10 |
AT5G53970.1 |
-1 |
2e-135 |
412 |
219/405 (54%) |
Tyrosine transaminase family protein | chr5:21910676-21912594 FORWARD LENGTH=414 |