MLOC_55373 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains30.237345.235221.452340.9995
LEAShoots from the seedlings (10 cm shoot stage)36.403338.696623.367931.1141
INF1Young developing inflorescences (5mm)9.691077.888764.273377.05166
INF2Developing inflorescences (1-1.5 cm)4.89357.191808.90503
ROORoots from the seedlings (10 cm shoot stage)103.27146.566274.741212.253
NODDeveloping tillers at six leaf stage, 3rd internode03.703931.3595417.8503
CAR5Developing grain, bracts removed (5 DPA)4.203492.544512.5143.25358
CAR15Developing grain, bracts removed (15 DPA)48.031530.345329.401196.9963



CDS Structure of MLOC_55373






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_55373.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_55373.1CUST_7709_PI427708083AvailableAvailablecontig_39903 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g08350.1 -2 8e-21 82 43/47 (91%) 13101.m00872 protein ATP synthase subunit alpha, mitochondrial, putative
TAIR PP10 ATMG01190.1 -2 1e-17 77 40/45 (89%) | Symbols: ATP1 | ATP synthase subunit 1 | chrM:302166-303689 REVERSE LENGTH=507