- Predicted Gene MLOC_55371
MLOC_55371 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 20.8956 | 21.7412 | 23.7264 | 23.0298 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 34.2994 | 23.1229 | 25.2132 | 23.6058 |
| INF1 | Young developing inflorescences (5mm) | 15.7689 | 17.1763 | 17.7457 | 14.9226 |
| INF2 | Developing inflorescences (1-1.5 cm) | 14.8738 | 15.1307 | 16.4306 | 17.4217 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 27.8126 | 29.4639 | 24.3349 | 35.6131 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 44.8108 | 31.8536 | 45.5185 | 112.239 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 46.9205 | 52.2869 | 53.8016 | 52.0999 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 63.377 | 58.9692 | 60.7423 | 152.007 |
CDS Structure of MLOC_55371
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_55371.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os08g41100.1 |
-2 |
0.0 |
523 |
243/289 (84%) |
13108.m04407 protein CHIT12 - Chitinase family protein precursor, expressed |
| TAIR PP10 |
AT1G05850.1 |
-2 |
2e-143 |
417 |
188/277 (68%) |
| Symbols: POM1, ERH2, ELP1, CTL1, ELP, HOT2, ATCTL1 | Chitinase family protein | chr1:1766833-1768117 REVERSE LENGTH=321 |