MLOC_5537 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 14.7827 | 11.1625 | 16.0766 | 12.5228 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 10.154 | 10.6246 | 16.2327 | 9.67875 |
| INF1 | Young developing inflorescences (5mm) | 15.5679 | 13.421 | 16.7461 | 12.1723 |
| INF2 | Developing inflorescences (1-1.5 cm) | 11.3003 | 11.8389 | 16.2681 | 13.0289 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 19.4328 | 14.7514 | 17.7807 | 17.1774 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 6.32156 | 7.38289 | 9.81649 | 22.5872 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 11.8322 | 12.2073 | 12.359 | 10.9251 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 3.67154 | 2.82551 | 3.4415 | 7.54644 |
CDS Structure of MLOC_5537
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_5537.3
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os02g33860.1 |
-1 |
0.0 |
543 |
265/330 (80%) |
13102.m03674 protein WD domain, G-beta repeat domain containing protein, expressed |
| TAIR PP10 |
AT5G64730.1 |
-1 |
3e-152 |
437 |
211/327 (65%) |
Transducin/WD40 repeat-like superfamily protein | chr5:25873146-25875021 FORWARD LENGTH=299 |
