- Predicted Gene MLOC_55351
MLOC_55351 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_55351_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_55351_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 3.6189 | 5.84307 | 5.21802 | 4.25549 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 4.14291 | 2.13591 | 2.82201 | 2.37868 |
INF1 | Young developing inflorescences (5mm) | 5.91505 | 5.94075 | 5.31675 | 4.32442 |
INF2 | Developing inflorescences (1-1.5 cm) | 2.34368 | 2.20083 | 2.49548 | 2.23675 |
ROO | Roots from the seedlings (10 cm shoot stage) | 3.13034 | 3.74845 | 2.56002 | 3.55943 |
NOD | Developing tillers at six leaf stage, 3rd internode | 1.64592 | 2.14214 | 3.024 | 6.35232 |
CAR5 | Developing grain, bracts removed (5 DPA) | 3.34351 | 3.48355 | 4.15097 | 3.0606 |
CAR15 | Developing grain, bracts removed (15 DPA) | 1.75635 | 1.83772 | 1.54501 | 3.53113 |
CDS Structure of MLOC_55351
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_55351.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os05g05130.1 |
+3 |
5e-94 |
292 |
193/277 (70%) |
13105.m00527 protein GA20663-PA, putative, expressed |
TAIR PP10 |
AT5G27400.1 |
+3 |
4e-65 |
219 |
170/354 (48%) |
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein | chr5:9676362-9678285 FORWARD LENGTH=369 |