- Predicted Gene MLOC_55350
MLOC_55350 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 0.499731 | 0.241833 | 0.29186 | 0.332153 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 3.29598 | 6.07589 | 8.95848 | 5.35117 |
| INF1 | Young developing inflorescences (5mm) | 0.0341286 | 0.0198796 | 0 | 0.0261205 |
| INF2 | Developing inflorescences (1-1.5 cm) | 0 | 0 | 0 | 0 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 0.240373 | 0.0775358 | 0.0597182 | 0.115186 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 2.66719 | 1.80998 | 5.60057 | 8.04612 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 1.33779 | 1.39225 | 1.53287 | 1.57827 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 0.195852 | 0.157351 | 0.108063 | 0.432714 |
CDS Structure of MLOC_55350
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_55350.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os08g30100.1 |
-1 |
7e-126 |
382 |
218/366 (60%) |
13108.m03115 protein 1-aminocyclopropane-1-carboxylate oxidase homolog 1, putative, expressed |
| TAIR PP10 |
AT1G06620.1 |
-1 |
2e-104 |
325 |
184/364 (51%) |
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein | chr1:2025618-2027094 FORWARD LENGTH=365 |