- Predicted Gene MLOC_55337
MLOC_55337 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_55337_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_55337_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 12.1998 | 11.01 | 10.2048 | 10.2704 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 27.5103 | 44.8454 | 80.9918 | 39.7627 |
INF1 | Young developing inflorescences (5mm) | 6.25545 | 6.43598 | 6.10187 | 5.46211 |
INF2 | Developing inflorescences (1-1.5 cm) | 5.16787 | 4.46905 | 5.56624 | 5.60325 |
ROO | Roots from the seedlings (10 cm shoot stage) | 34.3422 | 16.3702 | 21.384 | 20.1744 |
NOD | Developing tillers at six leaf stage, 3rd internode | 49.3289 | 73.1498 | 90.5001 | 212.258 |
CAR5 | Developing grain, bracts removed (5 DPA) | 10.002 | 11.047 | 8.80696 | 10.0678 |
CAR15 | Developing grain, bracts removed (15 DPA) | 4.86129 | 5.6889 | 3.82866 | 12.2098 |
CDS Structure of MLOC_55337
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_55337.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os02g07160.1 |
+3 |
0.0 |
600 |
352/414 (85%) |
13102.m00807 protein glyoxalase family protein, putative, expressed |
TAIR PP10 |
AT1G06570.1 |
+3 |
2e-154 |
459 |
257/412 (62%) |
| Symbols: PDS1, HPD | phytoene desaturation 1 | chr1:2012015-2013543 REVERSE LENGTH=473 |