- Predicted Gene MLOC_55294
MLOC_55294 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 22.6289 | 21.0647 | 21.1667 | 21.3227 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 21.291 | 9.29436 | 8.73557 | 10.7387 |
| INF1 | Young developing inflorescences (5mm) | 110.115 | 167.53 | 147.763 | 126.766 |
| INF2 | Developing inflorescences (1-1.5 cm) | 57.4592 | 48.5089 | 33.7259 | 55.8217 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 16.024 | 13.7346 | 18.5882 | 16.688 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 42.251 | 39.1207 | 15.9652 | 104.272 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 3.19393 | 4.1538 | 3.84776 | 3.92075 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 1.37396 | 1.32425 | 1.19709 | 3.34003 |
CDS Structure of MLOC_55294
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_55294.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os04g10460.1 |
+1 |
0.0 |
600 |
351/483 (73%) |
13104.m00941 protein amidase, putative, expressed |
| TAIR PP10 |
AT4G34880.1 |
+1 |
6e-131 |
397 |
251/485 (52%) |
Amidase family protein | chr4:16615549-16617424 FORWARD LENGTH=466 |