- Predicted Gene MLOC_55253
MLOC_55253 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 4.61987 | 4.58465 | 4.13293 | 4.76901 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 21.8094 | 10.06 | 7.53426 | 11.9008 |
| INF1 | Young developing inflorescences (5mm) | 0.550519 | 0.636046 | 1.03111 | 0.614432 |
| INF2 | Developing inflorescences (1-1.5 cm) | 4.37261 | 2.7215 | 4.11583 | 4.01551 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 15.4922 | 9.63816 | 9.92094 | 14.0313 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 3.6997 | 5.16644 | 3.67614 | 17.7483 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 9.02669 | 7.7089 | 4.67841 | 7.27771 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 10.785 | 12.3355 | 10.6444 | 26.003 |
CDS Structure of MLOC_55253
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_55253.3
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os03g18200.1 |
+3 |
0.0 |
808 |
432/534 (81%) |
13103.m02180 protein heat shock protein DnaJ, putative, expressed |
| TAIR PP10 |
AT3G08970.1 |
+3 |
0.0 |
540 |
288/563 (51%) |
| Symbols: ATERDJ3A, TMS1 | DNAJ heat shock N-terminal domain-containing protein | chr3:2737589-2740265 FORWARD LENGTH=572 |