- Predicted Gene MLOC_55237
MLOC_55237 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 0 | 0.267304 | 0 | 0.884593 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 0.242531 | 0.490633 | 0.40738 | 0.979895 |
| INF1 | Young developing inflorescences (5mm) | 0.399317 | 0.673986 | 1.14825 | 1.0024 |
| INF2 | Developing inflorescences (1-1.5 cm) | 0 | 0.197055 | 0.145714 | 0.696282 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 0.252468 | 0 | 0 | 0.395069 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 0 | 0.166975 | 0.236065 | 1.32776 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 0.2712 | 0 | 0.149903 | 0.98728 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 0.143551 | 0 | 0 | 0.404935 |
CDS Structure of MLOC_55237
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_55237.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os08g31460.1 |
-1 |
7e-40 |
144 |
69/104 (66%) |
13108.m03262 protein GTPase of unknown function domain containing protein, putative, expressed |
| TAIR PP10 |
AT1G78010.1 |
-1 |
8e-26 |
94 |
47/87 (54%) |
tRNA modification GTPase, putative | chr1:29333535-29336297 FORWARD LENGTH=560 |