MLOC_55215 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains50.262658.92455.066544.2921
LEAShoots from the seedlings (10 cm shoot stage)33.789630.498620.500519.4729
INF1Young developing inflorescences (5mm)26.825324.536225.724618.016
INF2Developing inflorescences (1-1.5 cm)21.142422.705127.227420.5634
ROORoots from the seedlings (10 cm shoot stage)25.693544.41753.272436.1443
NODDeveloping tillers at six leaf stage, 3rd internode34.18167.0381718.536422.0508
CAR5Developing grain, bracts removed (5 DPA)51.180559.042550.535341.0879
CAR15Developing grain, bracts removed (15 DPA)27.246625.988821.273350.8197



CDS Structure of MLOC_55215






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by AK249845.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK249845.1CUST_13560_PI427708083NoneNoneNone
MLOC_55215.1NoneAvailableAvailablecontig_39762 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----