- Predicted Gene MLOC_55190
MLOC_55190 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 2.92694 | 2.79197 | 2.7453 | 2.76933 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 2.62495 | 3.22496 | 4.1455 | 2.63671 |
| INF1 | Young developing inflorescences (5mm) | 0.342343 | 0.314018 | 0.309959 | 0.288352 |
| INF2 | Developing inflorescences (1-1.5 cm) | 0.0249844 | 0.147006 | 0.0612697 | 0.103191 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 6.56763 | 6.22193 | 3.92269 | 6.48296 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 0.0208753 | 0.221392 | 0.616136 | 0.845872 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 2.86333 | 3.0013 | 2.74503 | 2.96982 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 1.17277 | 0.75448 | 1.31335 | 2.5661 |
CDS Structure of MLOC_55190
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_55190.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os01g74490.1 |
+2 |
3e-31 |
122 |
60/73 (82%) |
13101.m08141 protein heavy metal-associated domain containing protein, expressed |
| TAIR PP10 |
AT2G28660.1 |
+2 |
7e-23 |
99 |
43/63 (68%) |
Chloroplast-targeted copper chaperone protein | chr2:12295419-12296944 FORWARD LENGTH=265 |