- Predicted Gene MLOC_55157
MLOC_55157 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_55157_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_55157_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 2.69264 | 1.37215 | 1.93632 | 1.71677 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 1.02427 | 0.245569 | 0.259467 | 0.394979 |
INF1 | Young developing inflorescences (5mm) | 4.15663 | 6.28745 | 5.37936 | 4.73761 |
INF2 | Developing inflorescences (1-1.5 cm) | 6.08459 | 6.926 | 6.6707 | 7.46523 |
ROO | Roots from the seedlings (10 cm shoot stage) | 1.22768 | 1.05505 | 1.16658 | 1.06188 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0.0398901 | 0.0442794 | 0.082708 | 0.124487 |
CAR5 | Developing grain, bracts removed (5 DPA) | 10.9979 | 11.3753 | 13.8957 | 11.9592 |
CAR15 | Developing grain, bracts removed (15 DPA) | 1.76831 | 1.44116 | 1.37273 | 3.92084 |
CDS Structure of MLOC_55157
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_55157.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os04g42100.1 |
-3 |
2e-147 |
446 |
234/298 (79%) |
13104.m04145 protein retrotransposon protein, putative, unclassified, expressed |
TAIR PP10 |
AT2G24800.1 |
-3 |
9e-101 |
317 |
160/295 (54%) |
Peroxidase superfamily protein | chr2:10571255-10572570 REVERSE LENGTH=329 |