MLOC_55137 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains8.2077611.710412.235710.9303
LEAShoots from the seedlings (10 cm shoot stage)16.71019.503859.1917210.2894
INF1Young developing inflorescences (5mm)11.525512.466311.234610.2103
INF2Developing inflorescences (1-1.5 cm)12.16215.539414.778315.8592
ROORoots from the seedlings (10 cm shoot stage)17.969118.664616.574422.5356
NODDeveloping tillers at six leaf stage, 3rd internode25.304251.318715.3414146.515
CAR5Developing grain, bracts removed (5 DPA)65.714163.754265.526364.7645
CAR15Developing grain, bracts removed (15 DPA)1.09070.8486081.176452.37588



CDS Structure of MLOC_55137






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_55137.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK376101NoneNoneNoneNone
MLOC_55137.2CUST_3361_PI427708080AvailableAvailablecontig_39691 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os07g48310.2 -3 0.0 849 507/618 (82%) 13107.m05165 protein inactive receptor kinase At2g26730 precursor, putative, expressed
TAIR PP10 AT5G58300.2 -3 0.0 571 364/614 (59%) Leucine-rich repeat protein kinase family protein | chr5:23572821-23574871 FORWARD LENGTH=654