MLOC_55134 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains48.341329.576335.180236.6143
LEAShoots from the seedlings (10 cm shoot stage)5.651666.159928.063865.36648
INF1Young developing inflorescences (5mm)00.08466140.05889630.101474
INF2Developing inflorescences (1-1.5 cm)0.1345630.02596090.1247860.113713
ROORoots from the seedlings (10 cm shoot stage)17.015113.768311.488315.935
NODDeveloping tillers at six leaf stage, 3rd internode3.611146.5599110.932219.9803
CAR5Developing grain, bracts removed (5 DPA)0.8626840.8198520.8522290.932829
CAR15Developing grain, bracts removed (15 DPA)0.362680.5377180.4279671.25106



CDS Structure of MLOC_55134






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_55134.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_55134.1CUST_13330_PI427708080AvailableAvailablecontig_39687 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os09g23160.1 +2 3e-165 473 235/313 (75%) 13109.m02181 protein annexin, putative, expressed
TAIR PP10 AT1G68090.1 +2 3e-105 319 168/313 (54%) | Symbols: ANNAT5, ANN5 | annexin 5 | chr1:25519442-25520774 REVERSE LENGTH=316