MLOC_55128 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.4960550.052112202.19983
LEAShoots from the seedlings (10 cm shoot stage)0.1967070.074750601.25459
INF1Young developing inflorescences (5mm)0.2874920.4568430.08173322.58168
INF2Developing inflorescences (1-1.5 cm)1.2881.225390.3479895.86876
ROORoots from the seedlings (10 cm shoot stage)00.1090870.7617722.55783
NODDeveloping tillers at six leaf stage, 3rd internode0.21234402.1466916.0556
CAR5Developing grain, bracts removed (5 DPA)1.180790.1687450.04846556.7483
CAR15Developing grain, bracts removed (15 DPA)7.69334e-0500.2704050.929347



CDS Structure of MLOC_55128






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_55128.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK357902NoneNoneNoneNone
MLOC_55128.1CUST_555_PI427708083AvailableAvailablecontig_39681 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g56220.1 +3 0.0 566 294/333 (88%) 13103.m06127 protein stress-induced protein, putative, expressed
TAIR PP10 AT1G10020.1 +3 5e-122 367 206/360 (57%) Protein of unknown function (DUF1005) | chr1:3269939-3271732 REVERSE LENGTH=461