- Predicted Gene MLOC_55124
MLOC_55124 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_55124_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_55124_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 690.682 | 421.737 | 447.943 | 480.529 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 231.323 | 146.958 | 176.027 | 149.319 |
INF1 | Young developing inflorescences (5mm) | 669.351 | 713.194 | 826.02 | 605.945 |
INF2 | Developing inflorescences (1-1.5 cm) | 539.086 | 509.875 | 572.422 | 576.504 |
ROO | Roots from the seedlings (10 cm shoot stage) | 421.548 | 361.881 | 490.524 | 430.99 |
NOD | Developing tillers at six leaf stage, 3rd internode | 131.53 | 82.1153 | 110.219 | 254.4 |
CAR5 | Developing grain, bracts removed (5 DPA) | 230.78 | 278.593 | 254.296 | 250.537 |
CAR15 | Developing grain, bracts removed (15 DPA) | 47.4851 | 43.1297 | 52.8537 | 110.379 |
CDS Structure of MLOC_55124
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_55124.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os11g41610.1 |
+3 |
2e-37 |
128 |
55/56 (98%) |
13111.m04131 protein 40S ribosomal protein S29, putative |
TAIR PP10 |
AT4G33865.1 |
+3 |
2e-35 |
122 |
52/56 (93%) |
Ribosomal protein S14p/S29e family protein | chr4:16233395-16234114 REVERSE LENGTH=56 |