- Predicted Gene MLOC_55123
MLOC_55123 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 5.51883 | 4.71181 | 5.06392 | 5.44784 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 1.14717 | 1.14926 | 1.0483 | 0.951435 |
| INF1 | Young developing inflorescences (5mm) | 0.227658 | 0.270998 | 0.117777 | 0.208663 |
| INF2 | Developing inflorescences (1-1.5 cm) | 0.48347 | 0.678237 | 0.395763 | 0.704412 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 19.8177 | 15.3941 | 22.2361 | 20.0886 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 0.614789 | 0.380968 | 1.1771 | 1.61896 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 1.03991 | 0.826034 | 0.686275 | 0.958658 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 1.20344 | 1.6115 | 0.826834 | 3.61685 |
CDS Structure of MLOC_55123
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_55123.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os01g70930.1 |
-2 |
2e-173 |
499 |
264/353 (75%) |
13101.m07719 protein leucoanthocyanidin dioxygenase, putative, expressed |
| TAIR PP10 |
AT3G21420.1 |
-2 |
9e-137 |
405 |
210/356 (59%) |
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein | chr3:7541579-7543221 FORWARD LENGTH=364 |