MLOC_55117 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains1510.872791.142022.310
LEAShoots from the seedlings (10 cm shoot stage)1804.751415.52804.1280
INF1Young developing inflorescences (5mm)3333.332636.2721890
INF2Developing inflorescences (1-1.5 cm)2972.12019.651853.140
ROORoots from the seedlings (10 cm shoot stage)987.7621524.121517.930
NODDeveloping tillers at six leaf stage, 3rd internode316.28397.0193169.160
CAR5Developing grain, bracts removed (5 DPA)2061.522031.611923.750
CAR15Developing grain, bracts removed (15 DPA)838.242952.542643.7920



CDS Structure of MLOC_55117






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK356416
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK356416CUST_23903_PI427708080NoneNoneNone
MLOC_27425.1NoneAvailableNonecontig_183088 (Mapped)
MLOC_55117.1NoneAvailableNonecontig_396766 (Not mapped)
MLOC_69283.1NoneAvailableAvailablecontig_56196 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----