MLOC_55113 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains51.6223125.503107.6580
LEAShoots from the seedlings (10 cm shoot stage)123.52171.215969.31080
INF1Young developing inflorescences (5mm)51.39540.089942.77280
INF2Developing inflorescences (1-1.5 cm)36.951246.708440.14670
ROORoots from the seedlings (10 cm shoot stage)48.407968.305732.77780
NODDeveloping tillers at six leaf stage, 3rd internode126.785130.68933.47140
CAR5Developing grain, bracts removed (5 DPA)74.523578.073171.23030
CAR15Developing grain, bracts removed (15 DPA)10.13418.6572711.75540



CDS Structure of MLOC_55113






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK249710.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK249710.1CUST_18727_PI427708080NoneNoneNone
MLOC_1810.2NoneAvailableNonecontig_116043 (Mapped)
MLOC_42078.1NoneAvailableNonecontig_2622836 (Not mapped)
MLOC_55113.1NoneAvailableNonecontig_39669 (Mapped)
MLOC_66461.2NoneAvailableAvailablecontig_51584 (Mapped)
MLOC_78912.3NoneAvailableNonecontig_8246 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----