MLOC_5511 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_5511_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_5511_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 6.27315 | 5.51293 | 5.75997 | 6.55321 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 1.9518 | 0.323699 | 0.305777 | 0.781773 |
INF1 | Young developing inflorescences (5mm) | 17.3686 | 15.5374 | 12.9276 | 14.2143 |
INF2 | Developing inflorescences (1-1.5 cm) | 11.8346 | 13.3777 | 12.0151 | 15.4482 |
ROO | Roots from the seedlings (10 cm shoot stage) | 1.68427 | 3.75549 | 3.0994 | 4.9669 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0.115421 | 0.176076 | 0.0466903 | 0.610761 |
CAR5 | Developing grain, bracts removed (5 DPA) | 4.71584 | 4.47633 | 4.03223 | 4.94737 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0.567265 | 0.452926 | 0.401464 | 1.25328 |
CDS Structure of MLOC_5511
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_5511.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os08g05560.1 |
+3 |
0.0 |
648 |
374/593 (63%) |
13108.m00545 protein zinc finger, C3HC4 type domain containing protein, expressed |
TAIR PP10 |
AT4G01270.1 |
+3 |
6e-60 |
212 |
123/288 (43%) |
RING/U-box superfamily protein | chr4:532351-534891 FORWARD LENGTH=506 |