MLOC_55105 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains10.96829.8932610.146311.7498
LEAShoots from the seedlings (10 cm shoot stage)7.73046.103898.803547.1567
INF1Young developing inflorescences (5mm)14.512519.12322.76718.382
INF2Developing inflorescences (1-1.5 cm)18.955922.698620.632426.6182
ROORoots from the seedlings (10 cm shoot stage)13.309810.16698.1747414.4507
NODDeveloping tillers at six leaf stage, 3rd internode17.643831.377920.0139100.194
CAR5Developing grain, bracts removed (5 DPA)25.182530.992631.113134.3848
CAR15Developing grain, bracts removed (15 DPA)5.386264.929535.2145113.583



CDS Structure of MLOC_55105






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK375997
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK375997CUST_22938_PI427708080NoneNoneNone
MLOC_34095.1NoneAvailableNonecontig_2423824 (Not mapped)
MLOC_55105.1NoneAvailableAvailablecontig_39657 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----