- Predicted Gene MLOC_55102
MLOC_55102 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_55102_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_55102_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 0.143358 | 0.360196 | 0.219501 | 0.284432 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 0 | 0 | 0 | 0 |
INF1 | Young developing inflorescences (5mm) | 0 | 0 | 0 | 0 |
INF2 | Developing inflorescences (1-1.5 cm) | 0 | 0 | 0 | 0 |
ROO | Roots from the seedlings (10 cm shoot stage) | 1.18356 | 0.714912 | 0.378314 | 0.944912 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0.273336 | 0.19171 | 0.326512 | 0.703262 |
CAR5 | Developing grain, bracts removed (5 DPA) | 0.0292089 | 0 | 0 | 0.0261347 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0.566212 | 0.53217 | 0.673752 | 1.37558 |
CDS Structure of MLOC_55102
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_55102.5
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os01g66850.1 |
-2 |
6e-180 |
518 |
248/374 (66%) |
13101.m42769 protein pectinacetylesterase domain containing protein, expressed |
TAIR PP10 |
AT3G09410.1 |
-2 |
2e-133 |
399 |
183/363 (50%) |
Pectinacetylesterase family protein | chr3:2898243-2900984 REVERSE LENGTH=427 |