- Predicted Gene MLOC_55090
MLOC_55090 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_55090_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_55090_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 18.2262 | 11.0653 | 11.7639 | 14.3452 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 0.151755 | 1.41486 | 0.36917 | 0.584137 |
INF1 | Young developing inflorescences (5mm) | 0.203892 | 0.197594 | 0.0713673 | 0.154197 |
INF2 | Developing inflorescences (1-1.5 cm) | 0.0605025 | 0.0388873 | 0.0244117 | 0.0538172 |
ROO | Roots from the seedlings (10 cm shoot stage) | 14.0197 | 9.47344 | 19.8119 | 13.8157 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0.318445 | 0.437883 | 0.179481 | 1.088 |
CAR5 | Developing grain, bracts removed (5 DPA) | 0.715715 | 0.974857 | 0.943597 | 0.995248 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0.0500786 | 0.03945 | 0.0730279 | 0.141072 |
CDS Structure of MLOC_55090
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_55090.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os06g37010.2 |
-3 |
2e-113 |
349 |
255/398 (64%) |
13106.m10553 protein metal cation transporter, putative, expressed |
TAIR PP10 |
AT3G12750.1 |
-3 |
7e-67 |
224 |
133/289 (46%) |
| Symbols: ZIP1 | zinc transporter 1 precursor | chr3:4051950-4053156 REVERSE LENGTH=355 |