- Predicted Gene MLOC_55057
MLOC_55057 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 28.1876 | 30.372 | 28.4521 | 33.4821 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 18.1822 | 18.2886 | 17.2434 | 16.6742 |
| INF1 | Young developing inflorescences (5mm) | 33.8732 | 30.5387 | 26.498 | 27.3332 |
| INF2 | Developing inflorescences (1-1.5 cm) | 22.5941 | 23.6859 | 22.9771 | 26.8464 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 13.9196 | 25.065 | 23.15 | 32.6013 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 3.47743 | 3.22454 | 4.75694 | 12.2312 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 30.3081 | 31.3921 | 29.997 | 32.2742 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 14.2146 | 13.7915 | 12.6191 | 33.6098 |
CDS Structure of MLOC_55057
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_55057.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os01g37837.1 |
+1 |
0.0 |
759 |
389/452 (86%) |
13101.m03853 protein seryl-tRNA synthetase, putative, expressed |
| TAIR PP10 |
AT5G27470.1 |
+1 |
0.0 |
644 |
321/464 (69%) |
seryl-tRNA synthetase / serine--tRNA ligase | chr5:9695087-9697154 FORWARD LENGTH=451 |