MLOC_55035 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains2.119273.694553.524972.90147
LEAShoots from the seedlings (10 cm shoot stage)1.010530.5751980.5471330.592956
INF1Young developing inflorescences (5mm)2.002252.209982.603361.65354
INF2Developing inflorescences (1-1.5 cm)2.412273.037672.112672.56263
ROORoots from the seedlings (10 cm shoot stage)0.3842671.094491.97071.10905
NODDeveloping tillers at six leaf stage, 3rd internode0.3370070.3602880.7857811.30102
CAR5Developing grain, bracts removed (5 DPA)1.318261.124471.263541.04428
CAR15Developing grain, bracts removed (15 DPA)0.3902430.3005390.4681380.748451



CDS Structure of MLOC_55035






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_55035.9
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_55035.9CUST_13311_PI427708080AvailableAvailablecontig_39597 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os05g33644.1 -1 0.0 1261 647/811 (80%) 13105.m03490 protein inosine-uridine preferring nucleoside hydrolase family protein, putative, expressed
TAIR PP10 AT5G18860.1 -1 0.0 967 498/822 (61%) inosine-uridine preferring nucleoside hydrolase family protein | chr5:6291023-6295581 FORWARD LENGTH=890