- Predicted Gene MLOC_55034
MLOC_55034 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_55034_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_55034_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 1.49596 | 7.54843 | 5.75204 | 4.71581 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 8.90928 | 7.35348 | 5.68932 | 5.8775 |
INF1 | Young developing inflorescences (5mm) | 18.0429 | 16.2953 | 15.4358 | 12.2746 |
INF2 | Developing inflorescences (1-1.5 cm) | 21.8577 | 21.5649 | 18.6604 | 20.6248 |
ROO | Roots from the seedlings (10 cm shoot stage) | 2.38016 | 6.14579 | 4.30925 | 5.78731 |
NOD | Developing tillers at six leaf stage, 3rd internode | 2.18616 | 3.98699 | 3.71536 | 12.6539 |
CAR5 | Developing grain, bracts removed (5 DPA) | 8.67855 | 7.75553 | 9.94608 | 7.4372 |
CAR15 | Developing grain, bracts removed (15 DPA) | 4.38486 | 3.45244 | 3.65228 | 7.63901 |
CDS Structure of MLOC_55034
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_55034.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os03g52794.1 |
+1 |
0.0 |
4992 |
2699/3390 (80%) |
13103.m05758 protein phosphatidylinositol kinase, putative, expressed |
TAIR PP10 |
AT1G50030.2 |
+1 |
8e-67 |
253 |
180/609 (30%) |
| Symbols: TOR | target of rapamycin | chr1:18522626-18539619 REVERSE LENGTH=2454 |