MLOC_55033 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains13.973723.355622.032120.9344
LEAShoots from the seedlings (10 cm shoot stage)20.37396.782516.6579410.3408
INF1Young developing inflorescences (5mm)33.010832.488728.502526.3998
INF2Developing inflorescences (1-1.5 cm)33.042235.334631.439336.8446
ROORoots from the seedlings (10 cm shoot stage)7.3663615.677811.057218.0213
NODDeveloping tillers at six leaf stage, 3rd internode33.718436.009333.5016125.76
CAR5Developing grain, bracts removed (5 DPA)18.34117.462117.62917.3725
CAR15Developing grain, bracts removed (15 DPA)8.206386.455597.3531116.6004



CDS Structure of MLOC_55033






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_55033.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_55033.1CUST_13309_PI427708080AvailableAvailablecontig_39594 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os06g04560.1 +3 0.0 1527 802/886 (91%) 13106.m00415 protein kinesin motor domain containing protein, expressed
TAIR PP10 AT1G12430.1 +3 0.0 1153 629/926 (68%) | Symbols: PAK, ARK3 | armadillo repeat kinesin 3 | chr1:4234122-4238552 REVERSE LENGTH=919