MLOC_5503 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 568.998 | 396.719 | 523.719 | 479.127 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 210.356 | 249.393 | 117.782 | 162.986 |
| INF1 | Young developing inflorescences (5mm) | 243.029 | 295.653 | 359.315 | 282.828 |
| INF2 | Developing inflorescences (1-1.5 cm) | 91.4728 | 92.0891 | 96.9439 | 110.445 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 100.315 | 92.2182 | 179.535 | 122.617 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 207.538 | 20.2092 | 10.4558 | 46.6024 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 21.4745 | 22.0964 | 20.2679 | 22.6988 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 0.651204 | 0.96092 | 0.394069 | 1.88558 |
CDS Structure of MLOC_5503
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_5503.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os05g10210.1 |
+2 |
1e-85 |
266 |
127/212 (60%) |
13105.m01096 protein HAD superfamily phosphatase, putative, expressed |
| TAIR PP10 |
AT4G29260.1 |
+2 |
1e-63 |
208 |
97/212 (46%) |
HAD superfamily, subfamily IIIB acid phosphatase | chr4:14422310-14423409 REVERSE LENGTH=255 |
