- Predicted Gene MLOC_55027
MLOC_55027 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 38.9729 | 36.4161 | 38.6047 | 38.3991 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 31.0104 | 23.5912 | 25.921 | 21.7399 |
| INF1 | Young developing inflorescences (5mm) | 6.71669 | 6.5224 | 5.88212 | 5.8598 |
| INF2 | Developing inflorescences (1-1.5 cm) | 1.07225 | 1.01367 | 2.00287 | 1.4924 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 68.7854 | 64.6744 | 46.0026 | 71.1836 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 93.6561 | 108.402 | 189.791 | 340.964 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 6.49289 | 5.69384 | 5.42914 | 6.08952 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 1.74508 | 1.47674 | 1.21232 | 3.89655 |
CDS Structure of MLOC_55027
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_55027.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os02g08100.1 |
-1 |
0.0 |
852 |
470/531 (89%) |
13102.m00932 protein AMP-binding domain containing protein, expressed |
| TAIR PP10 |
AT1G51680.1 |
-1 |
0.0 |
635 |
347/537 (65%) |
| Symbols: 4CL1, 4CL.1, AT4CL1 | 4-coumarate:CoA ligase 1 | chr1:19159007-19161464 REVERSE LENGTH=561 |