- Predicted Gene MLOC_55025
MLOC_55025 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 22.8835 | 32.1783 | 31.8745 | 31.716 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 24.8043 | 17.6902 | 17.1884 | 17.7708 |
| INF1 | Young developing inflorescences (5mm) | 16.0651 | 15.8307 | 15.7816 | 14.0586 |
| INF2 | Developing inflorescences (1-1.5 cm) | 12.5434 | 15.3904 | 13.3674 | 16.053 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 21.9306 | 26.4797 | 22.6082 | 33.2711 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 32.2449 | 32.8681 | 30.4757 | 110.066 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 18.505 | 16.8761 | 18.7724 | 18.2775 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 2.41718 | 2.56756 | 2.44344 | 6.03698 |
CDS Structure of MLOC_55025
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_55025.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os01g12880.1 |
+3 |
0.0 |
940 |
533/728 (73%) |
13101.m01407 protein VHS and GAT domain containing protein, expressed |
| TAIR PP10 |
AT4G32760.1 |
+3 |
2e-147 |
457 |
322/736 (44%) |
ENTH/VHS/GAT family protein | chr4:15799376-15803832 FORWARD LENGTH=675 |