- Predicted Gene MLOC_55024
MLOC_55024 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 14.8307 | 15.5905 | 15.6372 | 14.4545 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 10.5035 | 7.27562 | 8.36524 | 7.53822 |
| INF1 | Young developing inflorescences (5mm) | 44.5496 | 40.2103 | 36.0933 | 31.404 |
| INF2 | Developing inflorescences (1-1.5 cm) | 34.9233 | 34.9788 | 31.7782 | 34.8698 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 7.44482 | 14.5091 | 14.2345 | 15.7055 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 0.684783 | 1.13577 | 3.79483 | 5.32457 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 21.4023 | 19.5931 | 22.3638 | 19.0727 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 4.74032 | 4.3774 | 4.21127 | 9.28342 |
CDS Structure of MLOC_55024
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_55024.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os03g05720.1 |
+1 |
6e-164 |
495 |
312/359 (87%) |
13103.m00617 protein WD domain, G-beta repeat domain containing protein, expressed |
| TAIR PP10 |
AT3G21540.1 |
+1 |
1e-133 |
416 |
247/371 (67%) |
transducin family protein / WD-40 repeat family protein | chr3:7586100-7590856 REVERSE LENGTH=955 |