MLOC_5502 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 4.55705 | 11.7608 | 10.2823 | 8.74463 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 13.5347 | 11.8381 | 9.9215 | 9.71724 |
| INF1 | Young developing inflorescences (5mm) | 27.7699 | 26.4282 | 29.8044 | 21.1397 |
| INF2 | Developing inflorescences (1-1.5 cm) | 32.4578 | 31.3796 | 29.7548 | 31.8615 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 2.84946 | 7.33883 | 5.62426 | 7.34061 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 5.8361 | 7.98004 | 6.42286 | 25.0148 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 16.9932 | 15.1854 | 16.7997 | 14.5461 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 9.2768 | 9.2391 | 8.73145 | 18.8745 |
CDS Structure of MLOC_5502
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_5502.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os07g46690.1 |
-2 |
0.0 |
1711 |
965/1592 (61%) |
13107.m04933 protein PHD-finger family protein, expressed |
| TAIR PP10 |
AT5G12400.1 |
-2 |
0.0 |
659 |
437/1273 (34%) |
DNA binding;zinc ion binding;DNA binding | chr5:4013813-4021018 FORWARD LENGTH=1602 |