- Predicted Gene MLOC_55011
MLOC_55011 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_55011_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_55011_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 0 | 0 | 0 | 0 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 0.0311308 | 0 | 0.0252951 | 0.0271682 |
INF1 | Young developing inflorescences (5mm) | 0.259769 | 0.568059 | 0.540054 | 0.341279 |
INF2 | Developing inflorescences (1-1.5 cm) | 0.154713 | 0.0773947 | 0.465684 | 0.190784 |
ROO | Roots from the seedlings (10 cm shoot stage) | 0.125886 | 0.0707174 | 0.0594035 | 0.0957463 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0.0318295 | 0.517745 | 0.274413 | 1.54993 |
CAR5 | Developing grain, bracts removed (5 DPA) | 0.215434 | 0.196453 | 0.187709 | 0.184521 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0.0189844 | 0.0193199 | 0.0280221 | 0.0433588 |
CDS Structure of MLOC_55011
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_55011.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os06g34440.1 |
+1 |
0.0 |
645 |
336/568 (59%) |
13106.m03557 protein dnaJ domain containing protein, expressed |
TAIR PP10 |
AT5G18750.1 |
+1 |
8e-85 |
296 |
179/497 (36%) |
DNAJ heat shock N-terminal domain-containing protein | chr5:6255177-6257831 FORWARD LENGTH=884 |