- Predicted Gene MLOC_55008
MLOC_55008 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_55008_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_55008_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 0.34311 | 0.465418 | 0.414073 | 0.522772 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 0.121286 | 0 | 0.125685 | 0.123977 |
INF1 | Young developing inflorescences (5mm) | 0.0206782 | 0 | 0 | 0.0190959 |
INF2 | Developing inflorescences (1-1.5 cm) | 0 | 0 | 0 | 0 |
ROO | Roots from the seedlings (10 cm shoot stage) | 2.39862 | 1.95217 | 1.86146 | 2.90273 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0 | 0.0160035 | 0 | 0.146801 |
CAR5 | Developing grain, bracts removed (5 DPA) | 0 | 0 | 0 | 0 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0.0799785 | 0.0226291 | 0.177741 | 0.232007 |
CDS Structure of MLOC_55008
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_55008.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os07g23570.1 |
-1 |
0.0 |
736 |
352/468 (75%) |
13107.m02314 protein cytochrome P450 72A1, putative, expressed |
TAIR PP10 |
AT2G46950.1 |
-1 |
3e-149 |
443 |
216/467 (46%) |
| Symbols: CYP709B2 | cytochrome P450, family 709, subfamily B, polypeptide 2 | chr2:19289466-19291541 REVERSE LENGTH=572 |