MLOC_55008 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.343110.4654180.4140730.522772
LEAShoots from the seedlings (10 cm shoot stage)0.12128600.1256850.123977
INF1Young developing inflorescences (5mm)0.0206782000.0190959
INF2Developing inflorescences (1-1.5 cm)0000
ROORoots from the seedlings (10 cm shoot stage)2.398621.952171.861462.90273
NODDeveloping tillers at six leaf stage, 3rd internode00.016003500.146801
CAR5Developing grain, bracts removed (5 DPA)0000
CAR15Developing grain, bracts removed (15 DPA)0.07997850.02262910.1777410.232007



CDS Structure of MLOC_55008






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_55008.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_55008.1CUST_13304_PI427708080AvailableAvailablecontig_39563 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os07g23570.1 -1 0.0 736 352/468 (75%) 13107.m02314 protein cytochrome P450 72A1, putative, expressed
TAIR PP10 AT2G46950.1 -1 3e-149 443 216/467 (46%) | Symbols: CYP709B2 | cytochrome P450, family 709, subfamily B, polypeptide 2 | chr2:19289466-19291541 REVERSE LENGTH=572