- Predicted Gene MLOC_55007
MLOC_55007 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_55007_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_55007_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 13.1274 | 19.3687 | 17.2005 | 18.0735 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 16.6978 | 11.8098 | 12.7486 | 12.5201 |
INF1 | Young developing inflorescences (5mm) | 15.7883 | 15.7084 | 14.9004 | 13.2755 |
INF2 | Developing inflorescences (1-1.5 cm) | 16.5225 | 17.634 | 16.3074 | 18.9911 |
ROO | Roots from the seedlings (10 cm shoot stage) | 10.2531 | 17.6108 | 11.3808 | 20.9492 |
NOD | Developing tillers at six leaf stage, 3rd internode | 13.5315 | 16.2894 | 12.3328 | 54.5802 |
CAR5 | Developing grain, bracts removed (5 DPA) | 29.3833 | 28.0031 | 28.5218 | 28.4374 |
CAR15 | Developing grain, bracts removed (15 DPA) | 12.4629 | 11.6182 | 9.32337 | 26.6666 |
CDS Structure of MLOC_55007
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_55007.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os03g61050.1 |
-3 |
0.0 |
1427 |
697/822 (85%) |
13103.m06708 protein FG-GAP repeat-containing protein, putative, expressed |
TAIR PP10 |
AT3G09090.1 |
-3 |
0.0 |
1132 |
564/868 (65%) |
| Symbols: DEX1 | defective in exine formation protein (DEX1) | chr3:2782912-2787552 REVERSE LENGTH=896 |