- Predicted Gene MLOC_54998
MLOC_54998 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_54998_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_54998_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 21.0573 | 15.5125 | 17.0823 | 18.1482 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 24.8908 | 25.6055 | 31.666 | 23.034 |
INF1 | Young developing inflorescences (5mm) | 16.9094 | 17.7903 | 16.7488 | 14.9998 |
INF2 | Developing inflorescences (1-1.5 cm) | 16.5548 | 17.2905 | 16.3535 | 19.3984 |
ROO | Roots from the seedlings (10 cm shoot stage) | 23.2799 | 22.5653 | 23.7983 | 26.8954 |
NOD | Developing tillers at six leaf stage, 3rd internode | 14.6043 | 18.0791 | 22.796 | 61.0217 |
CAR5 | Developing grain, bracts removed (5 DPA) | 18.0794 | 18.1237 | 18.7772 | 19.3323 |
CAR15 | Developing grain, bracts removed (15 DPA) | 8.97908 | 8.32635 | 6.58078 | 20.1926 |
CDS Structure of MLOC_54998
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_54998.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os06g50050.1 |
-1 |
0.0 |
651 |
343/383 (90%) |
13106.m05375 protein AAA-type ATPase family protein, putative |
TAIR PP10 |
AT4G27680.1 |
-1 |
0.0 |
541 |
279/372 (75%) |
P-loop containing nucleoside triphosphate hydrolases superfamily protein | chr4:13821263-13823083 FORWARD LENGTH=398 |