MLOC_54997 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains1.317181.96410.899811.61459
LEAShoots from the seedlings (10 cm shoot stage)13.688920.698143.408722.7966
INF1Young developing inflorescences (5mm)0.9086350.2907780.5546460.521832
INF2Developing inflorescences (1-1.5 cm)0.0882990.158640.3183530.228487
ROORoots from the seedlings (10 cm shoot stage)1.978761.134511.219381.58399
NODDeveloping tillers at six leaf stage, 3rd internode0.2305590.3332313.732623.03846
CAR5Developing grain, bracts removed (5 DPA)0.210010.7722651.278540.760574
CAR15Developing grain, bracts removed (15 DPA)1.057730.9013610.4811422.21448



CDS Structure of MLOC_54997






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_54997.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_54997.1CUST_7675_PI427708083AvailableAvailablecontig_39557 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os06g50070.1 +2 5e-11 59 29/35 (83%) 13106.m05378 protein expressed protein
TAIR PP10None-----