- Predicted Gene MLOC_54997
MLOC_54997 FPKM values
FPKM by Treatment | FPKM by Replicate |
|
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 1.31718 | 1.9641 | 0.89981 | 1.61459 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 13.6889 | 20.6981 | 43.4087 | 22.7966 |
INF1 | Young developing inflorescences (5mm) | 0.908635 | 0.290778 | 0.554646 | 0.521832 |
INF2 | Developing inflorescences (1-1.5 cm) | 0.088299 | 0.15864 | 0.318353 | 0.228487 |
ROO | Roots from the seedlings (10 cm shoot stage) | 1.97876 | 1.13451 | 1.21938 | 1.58399 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0.230559 | 0.333231 | 3.73262 | 3.03846 |
CAR5 | Developing grain, bracts removed (5 DPA) | 0.21001 | 0.772265 | 1.27854 | 0.760574 |
CAR15 | Developing grain, bracts removed (15 DPA) | 1.05773 | 0.901361 | 0.481142 | 2.21448 |
CDS Structure of MLOC_54997
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_54997.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os06g50070.1 |
+2 |
5e-11 |
59 |
29/35 (83%) |
13106.m05378 protein expressed protein |
TAIR PP10 | None | - | - | - | - | - |