MLOC_54988 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains16.927216.243516.067414.5214
LEAShoots from the seedlings (10 cm shoot stage)14.029612.247412.23649.2181
INF1Young developing inflorescences (5mm)37.963934.095439.255727.9478
INF2Developing inflorescences (1-1.5 cm)63.46149.387253.741254.2161
ROORoots from the seedlings (10 cm shoot stage)18.261719.523318.756818.4017
NODDeveloping tillers at six leaf stage, 3rd internode7.346616.2536614.796719.2176
CAR5Developing grain, bracts removed (5 DPA)42.336445.803945.70837.6561
CAR15Developing grain, bracts removed (15 DPA)12.671312.560713.308927.3266



CDS Structure of MLOC_54988






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK251055.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK251055.1CUST_18946_PI427708080NoneNoneNone
MLOC_15500.2NoneAvailableNonecontig_1570853 (Mapped)
MLOC_36622.1NoneAvailableNonecontig_2547062 (Mapped)
MLOC_54988.1NoneAvailableAvailablecontig_39553 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----