MLOC_54984 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains1.413671.983361.87341.87982
LEAShoots from the seedlings (10 cm shoot stage)0.9973910.4946440.6983620.695213
INF1Young developing inflorescences (5mm)0.3560890.4198120.2630110.295446
INF2Developing inflorescences (1-1.5 cm)0.3031050.05516240.2504990.191281
ROORoots from the seedlings (10 cm shoot stage)0.2497121.110561.203881.28523
NODDeveloping tillers at six leaf stage, 3rd internode1.304481.005770.06098013.1162
CAR5Developing grain, bracts removed (5 DPA)0.2971450.8626420.2434670.483837
CAR15Developing grain, bracts removed (15 DPA)0000



CDS Structure of MLOC_54984






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_54984.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_54984.1CUST_13300_PI427708080AvailableAvailablecontig_39552 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os07g32600.1 -2 3e-24 103 44/105 (42%) 13107.m03303 protein glucan endo-1,3-beta-glucosidase precursor, putative, expressed
TAIR PP10 AT5G35740.1 -2 9e-38 132 64/119 (54%) Carbohydrate-binding X8 domain superfamily protein | chr5:13910572-13911095 REVERSE LENGTH=119