- Predicted Gene MLOC_54984
MLOC_54984 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 1.41367 | 1.98336 | 1.8734 | 1.87982 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 0.997391 | 0.494644 | 0.698362 | 0.695213 |
| INF1 | Young developing inflorescences (5mm) | 0.356089 | 0.419812 | 0.263011 | 0.295446 |
| INF2 | Developing inflorescences (1-1.5 cm) | 0.303105 | 0.0551624 | 0.250499 | 0.191281 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 0.249712 | 1.11056 | 1.20388 | 1.28523 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 1.30448 | 1.00577 | 0.0609801 | 3.1162 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 0.297145 | 0.862642 | 0.243467 | 0.483837 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 0 | 0 | 0 | 0 |
CDS Structure of MLOC_54984
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_54984.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os07g32600.1 |
-2 |
3e-24 |
103 |
44/105 (42%) |
13107.m03303 protein glucan endo-1,3-beta-glucosidase precursor, putative, expressed |
| TAIR PP10 |
AT5G35740.1 |
-2 |
9e-38 |
132 |
64/119 (54%) |
Carbohydrate-binding X8 domain superfamily protein | chr5:13910572-13911095 REVERSE LENGTH=119 |