- Predicted Gene MLOC_54983
MLOC_54983 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 0.158049 | 0.648332 | 0.568676 | 0.493917 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 1.06669 | 1.76707 | 0.989518 | 1.09995 |
| INF1 | Young developing inflorescences (5mm) | 0.600323 | 0.657938 | 0.752187 | 0.537458 |
| INF2 | Developing inflorescences (1-1.5 cm) | 0.74017 | 0.581021 | 0.819809 | 0.733023 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 0.333282 | 0.66967 | 0.392494 | 0.75863 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 0.686734 | 0.803868 | 0.679798 | 2.8671 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 0.555622 | 0.530947 | 0.655017 | 0.544702 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 0.525097 | 0.542977 | 0.369579 | 1.07559 |
CDS Structure of MLOC_54983
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_54983.5
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os03g53990.1 |
+1 |
0.0 |
1209 |
672/987 (68%) |
13103.m05914 protein expressed protein |
| TAIR PP10 |
AT5G55540.1 |
+1 |
0.0 |
1206 |
695/1382 (50%) |
| Symbols: TRN1, LOP1 | tornado 1 | chr5:22496322-22500543 REVERSE LENGTH=1380 |