- Predicted Gene MLOC_54980
MLOC_54980 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 49.4279 | 58.4869 | 61.7511 | 49.604 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 44.0214 | 25.9733 | 29.2831 | 25.2175 |
| INF1 | Young developing inflorescences (5mm) | 62.8119 | 64.0228 | 62.4965 | 47.5572 |
| INF2 | Developing inflorescences (1-1.5 cm) | 50.0739 | 63.1547 | 61.206 | 54.6951 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 40.8765 | 43.5665 | 40.4181 | 42.474 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 29.4368 | 31.393 | 26.3021 | 82.8594 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 104.549 | 97.1928 | 102.048 | 82.9151 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 34.753 | 29.3669 | 31.5919 | 65.6934 |
CDS Structure of MLOC_54980
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_54980.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os04g57890.1 |
+1 |
0.0 |
1241 |
673/702 (96%) |
13104.m06074 protein oligosaccharyl transferase, putative, expressed |
| TAIR PP10 |
AT1G34130.1 |
+1 |
0.0 |
1155 |
596/702 (85%) |
| Symbols: STT3B | staurosporin and temperature sensitive 3-like b | chr1:12430000-12432985 FORWARD LENGTH=735 |